Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Gm37856-201ENSMUST00000191634 999 ntBASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Atpaf1Q811I0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Trmt13-210ENSMUST00000198454 880 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atpaf1Q811I0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Gm11539-201ENSMUST00000119837 557 ntBASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Gm29257-201ENSMUST00000186115 639 ntBASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atpaf1Q811I0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms