Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gm11543-201ENSMUST00000120758 370 ntBASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp6nlQ80XC3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Gm6415-201ENSMUST00000118488 348 ntBASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Mir6977-201ENSMUST00000184960 64 ntBASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp6nlQ80XC3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp6nlQ80XC3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Gm9824-201ENSMUST00000178707 561 ntBASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Gm27437-201ENSMUST00000183429 107 ntBASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Gm38225-201ENSMUST00000194001 393 ntBASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp6nlQ80XC3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms