Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Mir1982-201ENSMUST00000157368 74 ntBASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnrc18Q80WC3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Gm13392-201ENSMUST00000117708 150 ntBASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnrc18Q80WC3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm2451-201ENSMUST00000199447 999 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm10290-201ENSMUST00000200451 999 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.87□□□□□ -0.03
Tnrc18Q80WC3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnrc18Q80WC3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms