Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Gm5177-201ENSMUST00000183092 997 ntBASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf40bQ80W14 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Mir449b-201ENSMUST00000104833 80 ntBASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm18889-201ENSMUST00000174284 929 ntBASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm27622-201ENSMUST00000183779 60 ntBASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm9682-201ENSMUST00000197505 556 ntBASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf40bQ80W14 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.52■□□□□ 0.39
Prpf40bQ80W14 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf40bQ80W14 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms