Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm25948-201ENSMUST00000175334 112 ntBASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm27300-201ENSMUST00000184085 97 ntBASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm27335-201ENSMUST00000184758 97 ntBASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.89■□□□□ 0.13
Prpf38bQ80SY5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf38bQ80SY5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Gm25406-201ENSMUST00000157599 105 ntBASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Gm5682-201ENSMUST00000173402 505 ntBASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.87■□□□□ 0.13
Prpf38bQ80SY5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms