Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.03□□□□□ -0.16
Pif1Q80SX8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pif1Q80SX8 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.03□□□□□ -0.16
Pif1Q80SX8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.02□□□□□ -0.16
Pif1Q80SX8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Pif1Q80SX8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Gm12008-201ENSMUST00000117791 755 ntBASIC14.02□□□□□ -0.17
Pif1Q80SX8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.02□□□□□ -0.17
Pif1Q80SX8 Gm20553-201ENSMUST00000204205 844 ntBASIC14.02□□□□□ -0.17
Pif1Q80SX8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.02□□□□□ -0.17
Pif1Q80SX8 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.02□□□□□ -0.17
Pif1Q80SX8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pif1Q80SX8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.01□□□□□ -0.17
Pif1Q80SX8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pif1Q80SX8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Gm44729-201ENSMUST00000206759 2052 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pif1Q80SX8 Gm13410-201ENSMUST00000117058 1415 ntBASIC14□□□□□ -0.17
Pif1Q80SX8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pif1Q80SX8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pif1Q80SX8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms