Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Gm16198-201ENSMUST00000118766 670 ntBASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Rpph1-201ENSMUST00000175096 319 ntBASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Gm27321-201ENSMUST00000185021 205 ntBASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.15■□□□□ 0.5
Npc1l1Q6T3U4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1l1Q6T3U4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1l1Q6T3U4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1l1Q6T3U4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Npc1l1Q6T3U4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1l1Q6T3U4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Gm20949-201ENSMUST00000206478 952 ntBASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1l1Q6T3U4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms