Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.78□□□□□ -0.36
Rif1Q6PR54 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Gm5356-201ENSMUST00000093326 615 ntBASIC12.78□□□□□ -0.36
Rif1Q6PR54 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Gm29199-201ENSMUST00000187766 775 ntBASIC12.78□□□□□ -0.36
Rif1Q6PR54 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.78□□□□□ -0.36
Rif1Q6PR54 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rif1Q6PR54 Gm21854-201ENSMUST00000179901 471 ntBASIC12.77□□□□□ -0.37
Rif1Q6PR54 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Gm19220-201ENSMUST00000222682 803 ntBASIC12.77□□□□□ -0.37
Rif1Q6PR54 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rif1Q6PR54 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Gm3436-201ENSMUST00000179930 840 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 Gm9797-201ENSMUST00000052902 613 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Gm5187-201ENSMUST00000117317 991 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.76□□□□□ -0.37
Rif1Q6PR54 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rif1Q6PR54 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.75□□□□□ -0.37
Rif1Q6PR54 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms