Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Gm11950-201ENSMUST00000121615 838 ntBASIC15.03■□□□□ -0
Scaf4Q6PFF0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Gm45328-201ENSMUST00000210942 917 ntBASIC15.03■□□□□ -0
Scaf4Q6PFF0 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.03■□□□□ -0
Scaf4Q6PFF0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.03■□□□□ -0
Scaf4Q6PFF0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf4Q6PFF0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.02■□□□□ -0
Scaf4Q6PFF0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf4Q6PFF0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Scaf4Q6PFF0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scaf4Q6PFF0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf4Q6PFF0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms