Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Gm5745-201ENSMUST00000183748 313 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Gm42612-201ENSMUST00000197986 623 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Gm43170-201ENSMUST00000199827 612 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Olfr286-202ENSMUST00000205305 969 ntBASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.61■□□□□ 0.73
Chd4Q6PDQ2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Gm4875-201ENSMUST00000118257 786 ntBASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.6■□□□□ 0.73
Chd4Q6PDQ2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Gm15653-201ENSMUST00000119247 907 ntBASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Gm6218-201ENSMUST00000219812 628 ntBASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd4Q6PDQ2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.58■□□□□ 0.73
Chd4Q6PDQ2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd4Q6PDQ2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Gm6912-201ENSMUST00000117218 544 ntBASIC19.57■□□□□ 0.72
Chd4Q6PDQ2 Gm6222-201ENSMUST00000120787 396 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms