Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hmgb4Q6P8W9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hmgb4Q6P8W9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hmgb4Q6P8W9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hmgb4Q6P8W9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Gm44492-201ENSMUST00000197012 141 ntBASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hmgb4Q6P8W9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Gm18489-201ENSMUST00000172565 551 ntBASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hmgb4Q6P8W9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Gm13597-201ENSMUST00000121239 375 ntBASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.92■□□□□ 0.14
Hmgb4Q6P8W9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms