Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ParpbpQ6IRT3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Gm6089-201ENSMUST00000197666 938 ntBASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Mzt1-203ENSMUST00000227948 952 ntBASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ParpbpQ6IRT3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ParpbpQ6IRT3 Asic1-205ENSMUST00000228185 1818 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms