Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.23■□□□□ 0.67
Clcn1Q64347 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.23■□□□□ 0.67
Clcn1Q64347 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.23■□□□□ 0.67
Clcn1Q64347 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.23■□□□□ 0.67
Clcn1Q64347 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn1Q64347 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clcn1Q64347 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clcn1Q64347 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Gm24158-201ENSMUST00000175263 71 ntBASIC19.22■□□□□ 0.67
Clcn1Q64347 Gm10253-201ENSMUST00000194270 940 ntBASIC19.22■□□□□ 0.67
Clcn1Q64347 Gm2272-201ENSMUST00000194903 582 ntBASIC19.22■□□□□ 0.67
Clcn1Q64347 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.22■□□□□ 0.67
Clcn1Q64347 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clcn1Q64347 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn1Q64347 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Clcn1Q64347 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Gm13223-201ENSMUST00000118609 747 ntBASIC19.21■□□□□ 0.67
Clcn1Q64347 Gm12151-201ENSMUST00000121374 290 ntBASIC19.21■□□□□ 0.67
Clcn1Q64347 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.21■□□□□ 0.67
Clcn1Q64347 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Clcn1Q64347 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clcn1Q64347 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn1Q64347 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.2■□□□□ 0.66
Clcn1Q64347 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.2■□□□□ 0.66
Clcn1Q64347 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Gm6973-201ENSMUST00000117080 721 ntBASIC19.2■□□□□ 0.66
Clcn1Q64347 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.2■□□□□ 0.66
Clcn1Q64347 Gm12428-201ENSMUST00000119844 727 ntBASIC19.2■□□□□ 0.66
Clcn1Q64347 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.2■□□□□ 0.66
Clcn1Q64347 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clcn1Q64347 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn1Q64347 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clcn1Q64347 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clcn1Q64347 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Clcn1Q64347 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.19■□□□□ 0.66
Clcn1Q64347 Gm27618-201ENSMUST00000183671 60 ntBASIC19.19■□□□□ 0.66
Clcn1Q64347 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clcn1Q64347 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.19■□□□□ 0.66
Clcn1Q64347 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Clcn1Q64347 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn1Q64347 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms