Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Gm38266-201ENSMUST00000194931 421 ntBASIC12.38□□□□□ -0.43
Col7a1Q63870 Gm44608-201ENSMUST00000206827 855 ntBASIC12.38□□□□□ -0.43
Col7a1Q63870 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.38□□□□□ -0.43
Col7a1Q63870 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.38□□□□□ -0.43
Col7a1Q63870 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Gm24196-201ENSMUST00000179161 110 ntBASIC12.37□□□□□ -0.43
Col7a1Q63870 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.37□□□□□ -0.43
Col7a1Q63870 Gm43758-201ENSMUST00000199500 367 ntBASIC12.37□□□□□ -0.43
Col7a1Q63870 Gm45865-201ENSMUST00000211815 945 ntBASIC12.37□□□□□ -0.43
Col7a1Q63870 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.37□□□□□ -0.43
Col7a1Q63870 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col7a1Q63870 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col7a1Q63870 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.36□□□□□ -0.43
Col7a1Q63870 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Gm22323-201ENSMUST00000103832 109 ntBASIC12.36□□□□□ -0.43
Col7a1Q63870 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col7a1Q63870 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.36□□□□□ -0.43
Col7a1Q63870 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.36□□□□□ -0.43
Col7a1Q63870 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.36□□□□□ -0.43
Col7a1Q63870 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.36□□□□□ -0.43
Col7a1Q63870 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.36□□□□□ -0.43
Col7a1Q63870 B9d1os-201ENSMUST00000137010 674 ntBASIC12.36□□□□□ -0.43
Col7a1Q63870 Gm7287-201ENSMUST00000205267 602 ntBASIC12.36□□□□□ -0.43
Col7a1Q63870 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col7a1Q63870 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.36□□□□□ -0.43
Col7a1Q63870 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Col7a1Q63870 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col7a1Q63870 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.35□□□□□ -0.43
Col7a1Q63870 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col7a1Q63870 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col7a1Q63870 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms