Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Prob1-201ENSMUST00000097619 3021 ntBASIC14.12□□□□□ -0.15
VcanQ62059 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.12□□□□□ -0.15
VcanQ62059 Gm45784-201ENSMUST00000188360 142 ntBASIC14.12□□□□□ -0.15
VcanQ62059 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.12□□□□□ -0.15
VcanQ62059 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.12□□□□□ -0.15
VcanQ62059 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.12□□□□□ -0.15
VcanQ62059 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
VcanQ62059 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
VcanQ62059 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VcanQ62059 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.11□□□□□ -0.15
VcanQ62059 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Gm23931-201ENSMUST00000103842 109 ntBASIC14.11□□□□□ -0.15
VcanQ62059 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Gm4984-201ENSMUST00000115987 360 ntBASIC14.11□□□□□ -0.15
VcanQ62059 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.11□□□□□ -0.15
VcanQ62059 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VcanQ62059 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VcanQ62059 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.1□□□□□ -0.15
VcanQ62059 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.1□□□□□ -0.15
VcanQ62059 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VcanQ62059 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.1□□□□□ -0.15
VcanQ62059 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VcanQ62059 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VcanQ62059 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.1□□□□□ -0.15
VcanQ62059 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.1□□□□□ -0.15
VcanQ62059 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VcanQ62059 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Gm15808-201ENSMUST00000119046 604 ntBASIC14.09□□□□□ -0.15
VcanQ62059 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.09□□□□□ -0.15
VcanQ62059 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.09□□□□□ -0.15
VcanQ62059 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VcanQ62059 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.09□□□□□ -0.15
VcanQ62059 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VcanQ62059 Gm7593-201ENSMUST00000187246 644 ntBASIC14.08□□□□□ -0.15
VcanQ62059 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VcanQ62059 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.08□□□□□ -0.15
VcanQ62059 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VcanQ62059 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VcanQ62059 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VcanQ62059 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
VcanQ62059 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.08□□□□□ -0.16
VcanQ62059 Gm37714-201ENSMUST00000194742 342 ntBASIC14.08□□□□□ -0.16
VcanQ62059 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms