Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC20.23■□□□□ 0.83
Gli3Q61602 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Gli3Q61602 Gm5370-201ENSMUST00000187187 574 ntBASIC20.23■□□□□ 0.83
Gli3Q61602 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.23■□□□□ 0.83
Gli3Q61602 Gm9299-201ENSMUST00000206392 1140 ntBASIC20.23■□□□□ 0.83
Gli3Q61602 Gm45098-201ENSMUST00000207179 657 ntBASIC20.23■□□□□ 0.83
Gli3Q61602 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.23■□□□□ 0.83
Gli3Q61602 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.23■□□□□ 0.83
Gli3Q61602 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Gli3Q61602 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
Gli3Q61602 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Gm4691-201ENSMUST00000182339 1000 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 Gm2451-201ENSMUST00000199447 999 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Gm10290-201ENSMUST00000200451 999 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.22■□□□□ 0.83
Gli3Q61602 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli3Q61602 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Gm8775-201ENSMUST00000170943 1327 ntBASIC20.21■□□□□ 0.83
Gli3Q61602 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gli3Q61602 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Gm24196-201ENSMUST00000179161 110 ntBASIC20.21■□□□□ 0.83
Gli3Q61602 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gli3Q61602 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.21■□□□□ 0.83
Gli3Q61602 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Dctn4-202ENSMUST00000223590 1530 ntBASIC20.21■□□□□ 0.83
Gli3Q61602 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.21■□□□□ 0.83
Gli3Q61602 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli3Q61602 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC20.21■□□□□ 0.83
Gli3Q61602 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC20.21■□□□□ 0.83
Gli3Q61602 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gli3Q61602 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gli3Q61602 Gm26083-201ENSMUST00000157904 193 ntBASIC20.2■□□□□ 0.82
Gli3Q61602 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.2■□□□□ 0.82
Gli3Q61602 Gm18753-201ENSMUST00000201000 566 ntBASIC20.2■□□□□ 0.82
Gli3Q61602 Gm6916-202ENSMUST00000205523 195 ntBASIC20.2■□□□□ 0.82
Gli3Q61602 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.2■□□□□ 0.82
Gli3Q61602 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli3Q61602 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gli3Q61602 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC20.19■□□□□ 0.82
Gli3Q61602 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.19■□□□□ 0.82
Gli3Q61602 Gm43118-201ENSMUST00000199149 775 ntBASIC20.19■□□□□ 0.82
Gli3Q61602 Gm43068-201ENSMUST00000201095 1273 ntBASIC20.19■□□□□ 0.82
Gli3Q61602 Gm3961-201ENSMUST00000204425 994 ntBASIC20.19■□□□□ 0.82
Gli3Q61602 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC20.19■□□□□ 0.82
Gli3Q61602 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC20.19■□□□□ 0.82
Gli3Q61602 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.19■□□□□ 0.82
Gli3Q61602 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gli3Q61602 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gli3Q61602 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gli3Q61602 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.18■□□□□ 0.82
Gli3Q61602 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gli3Q61602 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC20.18■□□□□ 0.82
Gli3Q61602 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC20.18■□□□□ 0.82
Gli3Q61602 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.18■□□□□ 0.82
Gli3Q61602 Gm43822-201ENSMUST00000200285 476 ntBASIC20.18■□□□□ 0.82
Gli3Q61602 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gli3Q61602 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gli3Q61602 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC20.18■□□□□ 0.82
Gli3Q61602 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Gli3Q61602 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Gli3Q61602 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Gli3Q61602 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms