Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Clcn4Q61418 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn4Q61418 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn4Q61418 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Gm11452-201ENSMUST00000122376 690 ntBASIC14.03□□□□□ -0.16
Clcn4Q61418 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.03□□□□□ -0.16
Clcn4Q61418 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Rps4l-201ENSMUST00000071745 943 ntBASIC14.03□□□□□ -0.16
Clcn4Q61418 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.03□□□□□ -0.16
Clcn4Q61418 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn4Q61418 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clcn4Q61418 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.02□□□□□ -0.16
Clcn4Q61418 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.02□□□□□ -0.16
Clcn4Q61418 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn4Q61418 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.02□□□□□ -0.17
Clcn4Q61418 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Clcn4Q61418 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.02□□□□□ -0.17
Clcn4Q61418 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.02□□□□□ -0.17
Clcn4Q61418 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clcn4Q61418 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.02□□□□□ -0.17
Clcn4Q61418 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.02□□□□□ -0.17
Clcn4Q61418 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn4Q61418 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.01□□□□□ -0.17
Clcn4Q61418 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clcn4Q61418 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clcn4Q61418 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clcn4Q61418 Gm4609-201ENSMUST00000106443 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Gm5138-201ENSMUST00000113842 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm15191-201ENSMUST00000117933 1000 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm12182-201ENSMUST00000118655 1008 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm13882-201ENSMUST00000120886 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Gm10284-201ENSMUST00000145057 1005 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14□□□□□ -0.17
Clcn4Q61418 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Gm10481-201ENSMUST00000179228 1002 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms