Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Foxd1Q61345 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.53■□□□□ 0.4
Foxd1Q61345 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd1Q61345 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Mir1247-201ENSMUST00000116706 82 ntBASIC17.52■□□□□ 0.4
Foxd1Q61345 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Foxd1Q61345 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.52■□□□□ 0.4
Foxd1Q61345 Gm23984-201ENSMUST00000157139 203 ntBASIC17.52■□□□□ 0.4
Foxd1Q61345 Gm16570-201ENSMUST00000161951 436 ntBASIC17.52■□□□□ 0.4
Foxd1Q61345 Gm27838-201ENSMUST00000184829 128 ntBASIC17.52■□□□□ 0.4
Foxd1Q61345 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Foxd1Q61345 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Foxd1Q61345 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.52■□□□□ 0.4
Foxd1Q61345 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd1Q61345 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Foxd1Q61345 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Foxd1Q61345 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Foxd1Q61345 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Foxd1Q61345 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Foxd1Q61345 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Foxd1Q61345 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.51■□□□□ 0.39
Foxd1Q61345 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Foxd1Q61345 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.51■□□□□ 0.39
Foxd1Q61345 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Foxd1Q61345 Gm17150-201ENSMUST00000165577 381 ntBASIC17.51■□□□□ 0.39
Foxd1Q61345 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.51■□□□□ 0.39
Foxd1Q61345 Gm18018-201ENSMUST00000198273 408 ntBASIC17.51■□□□□ 0.39
Foxd1Q61345 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.51■□□□□ 0.39
Foxd1Q61345 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.51■□□□□ 0.39
Foxd1Q61345 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.51■□□□□ 0.39
Foxd1Q61345 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd1Q61345 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Foxd1Q61345 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.5■□□□□ 0.39
Foxd1Q61345 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.5■□□□□ 0.39
Foxd1Q61345 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Gm6257-201ENSMUST00000163864 910 ntBASIC17.5■□□□□ 0.39
Foxd1Q61345 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.5■□□□□ 0.39
Foxd1Q61345 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd1Q61345 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.5■□□□□ 0.39
Foxd1Q61345 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd1Q61345 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Foxd1Q61345 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.49■□□□□ 0.39
Foxd1Q61345 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms