Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.25■□□□□ 0.51
Mre11Q61216 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC18.25■□□□□ 0.51
Mre11Q61216 Gm10566-201ENSMUST00000086739 996 ntBASIC18.25■□□□□ 0.51
Mre11Q61216 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.25■□□□□ 0.51
Mre11Q61216 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.24■□□□□ 0.51
Mre11Q61216 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Mre11Q61216 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.24■□□□□ 0.51
Mre11Q61216 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.24■□□□□ 0.51
Mre11Q61216 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Mre11Q61216 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Mre11Q61216 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mre11Q61216 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Mre11Q61216 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.23■□□□□ 0.51
Mre11Q61216 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mre11Q61216 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.23■□□□□ 0.51
Mre11Q61216 Gm3375-201ENSMUST00000203929 796 ntBASIC18.23■□□□□ 0.51
Mre11Q61216 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.23■□□□□ 0.51
Mre11Q61216 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Mre11Q61216 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.23■□□□□ 0.51
Mre11Q61216 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Mre11Q61216 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.23■□□□□ 0.51
Mre11Q61216 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mre11Q61216 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.22■□□□□ 0.51
Mre11Q61216 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.22■□□□□ 0.51
Mre11Q61216 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Mre11Q61216 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.22■□□□□ 0.51
Mre11Q61216 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.22■□□□□ 0.51
Mre11Q61216 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.22■□□□□ 0.51
Mre11Q61216 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.22■□□□□ 0.51
Mre11Q61216 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.22■□□□□ 0.51
Mre11Q61216 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mre11Q61216 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.22■□□□□ 0.51
Mre11Q61216 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mre11Q61216 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Mre11Q61216 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Mre11Q61216 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Mre11Q61216 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.21■□□□□ 0.51
Mre11Q61216 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Mre11Q61216 Gm27463-201ENSMUST00000183569 57 ntBASIC18.21■□□□□ 0.51
Mre11Q61216 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Gm44430-201ENSMUST00000203376 995 ntBASIC18.21■□□□□ 0.51
Mre11Q61216 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Mre11Q61216 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Mre11Q61216 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.21■□□□□ 0.51
Mre11Q61216 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.21■□□□□ 0.51
Mre11Q61216 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Mre11Q61216 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mre11Q61216 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.21■□□□□ 0.51
Mre11Q61216 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.21■□□□□ 0.5
Mre11Q61216 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Mre11Q61216 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms