Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.82□□□□□ -0.04
Col12a1Q60847 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Snora78-201ENSMUST00000158630 128 ntBASIC14.82□□□□□ -0.04
Col12a1Q60847 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.82□□□□□ -0.04
Col12a1Q60847 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm4984-201ENSMUST00000115987 360 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm45784-201ENSMUST00000188360 142 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Col12a1Q60847 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm46209-201ENSMUST00000217912 553 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.81□□□□□ -0.04
Col12a1Q60847 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.81□□□□□ -0.04
Col12a1Q60847 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col12a1Q60847 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col12a1Q60847 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.8□□□□□ -0.04
Col12a1Q60847 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col12a1Q60847 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Gm28911-201ENSMUST00000188837 117 ntBASIC14.79□□□□□ -0.04
Col12a1Q60847 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.79□□□□□ -0.04
Col12a1Q60847 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Prob1-201ENSMUST00000097619 3021 ntBASIC14.79□□□□□ -0.04
Col12a1Q60847 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col12a1Q60847 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms