Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gm15794-201ENSMUST00000120182 631 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gm25016-201ENSMUST00000158399 131 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gm19164-201ENSMUST00000210667 640 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.49□□□□□ -0.09
Nr1h4Q60641 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nr1h4Q60641 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.48□□□□□ -0.09
Nr1h4Q60641 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Mir6982-201ENSMUST00000184354 68 ntBASIC14.48□□□□□ -0.09
Nr1h4Q60641 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.48□□□□□ -0.09
Nr1h4Q60641 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.48□□□□□ -0.09
Nr1h4Q60641 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nr1h4Q60641 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nr1h4Q60641 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.47□□□□□ -0.09
Nr1h4Q60641 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms