Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Rubie-203ENSMUST00000227803 2430 ntBASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf1Q5U4C3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Gm13464-201ENSMUST00000119418 935 ntBASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Gm17837-201ENSMUST00000186435 985 ntBASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf1Q5U4C3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm8410-201ENSMUST00000117225 605 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm15653-201ENSMUST00000119247 907 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm12428-201ENSMUST00000119844 727 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm9719-201ENSMUST00000162765 543 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf1Q5U4C3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf1Q5U4C3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms