Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.34□□□□□ -0.27
Vmn1r223Q5SSA0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vmn1r223Q5SSA0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vmn1r223Q5SSA0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vmn1r223Q5SSA0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vmn1r223Q5SSA0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmn1r223Q5SSA0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Gm28033-201ENSMUST00000184224 96 ntBASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmn1r223Q5SSA0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms