Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm5177-201ENSMUST00000183092 997 ntBASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Gm2756-201ENSMUST00000195851 400 ntBASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Gm6736-201ENSMUST00000166583 948 ntBASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Gm27702-201ENSMUST00000184512 56 ntBASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-4Q5R1I0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm14822-201ENSMUST00000122247 291 ntBASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm27301-201ENSMUST00000184012 127 ntBASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm45747-201ENSMUST00000212203 999 ntBASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Thap2-203ENSMUST00000218989 527 ntBASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6d-4Q5R1I0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-4Q5R1I0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms