Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Gm17808-201ENSMUST00000200859 894 ntBASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav8d-1Q5R1H8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Mir770-201ENSMUST00000103252 94 ntBASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Gm29518-201ENSMUST00000190858 372 ntBASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Gm44450-201ENSMUST00000199528 114 ntBASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Gm18421-201ENSMUST00000204122 625 ntBASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav8d-1Q5R1H8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms