Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.52■□□□□ 0.4
Rc3h1Q4VGL6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rc3h1Q4VGL6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Gm18889-201ENSMUST00000174284 929 ntBASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Mir6990-201ENSMUST00000183724 91 ntBASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rc3h1Q4VGL6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rc3h1Q4VGL6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Rprl2-201ENSMUST00000157150 290 ntBASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm43474-201ENSMUST00000196415 774 ntBASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Rc3h1Q4VGL6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms