Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Gm44771-201ENSMUST00000206975 626 ntBASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap2Q3V1H1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Gm9727-201ENSMUST00000161387 555 ntBASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.41■□□□□ 0.38
Ckap2Q3V1H1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Gm2272-201ENSMUST00000194903 582 ntBASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Gm5364-201ENSMUST00000216789 889 ntBASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.4■□□□□ 0.38
Ckap2Q3V1H1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms