Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC051142Q3V0M8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.27■□□□□ 0.2
BC051142Q3V0M8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BC051142Q3V0M8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Gm25990-201ENSMUST00000102440 86 ntBASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Gm11452-201ENSMUST00000122376 690 ntBASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC051142Q3V0M8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BC051142Q3V0M8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BC051142Q3V0M8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms