Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm7290-201ENSMUST00000104990 617 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm12918-201ENSMUST00000120234 636 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm15710-201ENSMUST00000121821 636 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm5075-201ENSMUST00000196916 622 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm9731-201ENSMUST00000209480 747 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Acot6-202ENSMUST00000222921 3622 ntBASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Rubie-203ENSMUST00000227803 2430 ntBASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Gm18671-201ENSMUST00000214826 683 ntBASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks1brtQ3UNC9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Gm42545-201ENSMUST00000202755 922 ntBASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms