Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrc28Q3TX51 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Mir1895-201ENSMUST00000122615 79 ntBASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Gm27494-201ENSMUST00000184735 189 ntBASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Gm45612-201ENSMUST00000211320 160 ntBASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lrrc28Q3TX51 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Lrrc28Q3TX51 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrrc28Q3TX51 Asic1-205ENSMUST00000228185 1818 ntBASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Gm11025-201ENSMUST00000140773 466 ntBASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Gm2272-201ENSMUST00000194903 582 ntBASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrrc28Q3TX51 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms