Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Q3KNL4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Q3KNL4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.97□□□□□ -0.01
Q3KNL4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Q3KNL4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.97□□□□□ -0.01
Q3KNL4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Q3KNL4 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.97□□□□□ -0.01
Q3KNL4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Q3KNL4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Q3KNL4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Q3KNL4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Q3KNL4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Q3KNL4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Q3KNL4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Q3KNL4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Q3KNL4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Q3KNL4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Q3KNL4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Q3KNL4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Q3KNL4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Q3KNL4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Q3KNL4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Q3KNL4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Q3KNL4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.95□□□□□ -0.02
Q3KNL4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.95□□□□□ -0.02
Q3KNL4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Q3KNL4 Gm33142-201ENSMUST00000193913 867 ntBASIC14.95□□□□□ -0.02
Q3KNL4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.95□□□□□ -0.02
Q3KNL4 Gm18622-201ENSMUST00000219361 595 ntBASIC14.95□□□□□ -0.02
Q3KNL4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.95□□□□□ -0.02
Q3KNL4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Q3KNL4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.95□□□□□ -0.02
Q3KNL4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.95□□□□□ -0.02
Q3KNL4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Q3KNL4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Q3KNL4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Q3KNL4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Q3KNL4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.94□□□□□ -0.02
Q3KNL4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Q3KNL4 Gm14859-201ENSMUST00000117752 357 ntBASIC14.94□□□□□ -0.02
Q3KNL4 Gm4459-201ENSMUST00000118750 468 ntBASIC14.94□□□□□ -0.02
Q3KNL4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.94□□□□□ -0.02
Q3KNL4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.94□□□□□ -0.02
Q3KNL4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.94□□□□□ -0.02
Q3KNL4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Q3KNL4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms