Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Gm13146-201ENSMUST00000118508 780 ntBASIC12.58□□□□□ -0.4
Trim63Q38HM4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Gm11643-201ENSMUST00000119578 864 ntBASIC12.58□□□□□ -0.4
Trim63Q38HM4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Matn2-206ENSMUST00000228570 2798 ntBASIC12.57□□□□□ -0.4
Trim63Q38HM4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Trim63Q38HM4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim63Q38HM4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim63Q38HM4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.56□□□□□ -0.4
Trim63Q38HM4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim63Q38HM4 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.55□□□□□ -0.4
Trim63Q38HM4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.55□□□□□ -0.4
Trim63Q38HM4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms