Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tff1Q08423 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tff1Q08423 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tff1Q08423 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tff1Q08423 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tff1Q08423 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tff1Q08423 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tff1Q08423 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tff1Q08423 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tff1Q08423 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.65□□□□□ -0.38
Tff1Q08423 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Tff1Q08423 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.65□□□□□ -0.38
Tff1Q08423 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Tff1Q08423 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.65□□□□□ -0.38
Tff1Q08423 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.65□□□□□ -0.38
Tff1Q08423 Gm2651-201ENSMUST00000203560 838 ntBASIC12.65□□□□□ -0.38
Tff1Q08423 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.65□□□□□ -0.38
Tff1Q08423 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tff1Q08423 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.65□□□□□ -0.38
Tff1Q08423 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Tff1Q08423 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tff1Q08423 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Tff1Q08423 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
Tff1Q08423 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tff1Q08423 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Tff1Q08423 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Tff1Q08423 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Gm27525-201ENSMUST00000184465 107 ntBASIC12.64□□□□□ -0.39
Tff1Q08423 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.64□□□□□ -0.39
Tff1Q08423 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tff1Q08423 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tff1Q08423 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tff1Q08423 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.63□□□□□ -0.39
Tff1Q08423 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tff1Q08423 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.63□□□□□ -0.39
Tff1Q08423 Gm12644-201ENSMUST00000119935 606 ntBASIC12.63□□□□□ -0.39
Tff1Q08423 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.63□□□□□ -0.39
Tff1Q08423 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.63□□□□□ -0.39
Tff1Q08423 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tff1Q08423 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tff1Q08423 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms