Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox4Q06831 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox4Q06831 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.94□□□□□ -0.02
Sox4Q06831 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox4Q06831 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox4Q06831 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox4Q06831 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox4Q06831 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.93□□□□□ -0.02
Sox4Q06831 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.93□□□□□ -0.02
Sox4Q06831 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox4Q06831 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox4Q06831 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.93□□□□□ -0.02
Sox4Q06831 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox4Q06831 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Sox4Q06831 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox4Q06831 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.92□□□□□ -0.02
Sox4Q06831 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox4Q06831 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
Sox4Q06831 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Gm11594-201ENSMUST00000122313 162 ntBASIC14.92□□□□□ -0.02
Sox4Q06831 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.92□□□□□ -0.02
Sox4Q06831 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox4Q06831 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.92□□□□□ -0.02
Sox4Q06831 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.92□□□□□ -0.02
Sox4Q06831 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sox4Q06831 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox4Q06831 Sybu-209ENSMUST00000228639 4113 ntBASIC14.92□□□□□ -0.02
Sox4Q06831 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Sox4Q06831 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sox4Q06831 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox4Q06831 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox4Q06831 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox4Q06831 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox4Q06831 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
Sox4Q06831 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Sox4Q06831 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Sox4Q06831 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.91□□□□□ -0.02
Sox4Q06831 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox4Q06831 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms