Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn1bP97952 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn1bP97952 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn1bP97952 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.95□□□□□ -0.18
Scn1bP97952 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn1bP97952 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scn1bP97952 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scn1bP97952 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.94□□□□□ -0.18
Scn1bP97952 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.94□□□□□ -0.18
Scn1bP97952 Gm2274-201ENSMUST00000184539 609 ntBASIC13.94□□□□□ -0.18
Scn1bP97952 Gm37055-201ENSMUST00000191866 133 ntBASIC13.94□□□□□ -0.18
Scn1bP97952 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.94□□□□□ -0.18
Scn1bP97952 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.94□□□□□ -0.18
Scn1bP97952 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn1bP97952 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1bP97952 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.93□□□□□ -0.18
Scn1bP97952 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scn1bP97952 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn1bP97952 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.93□□□□□ -0.18
Scn1bP97952 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn1bP97952 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn1bP97952 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn1bP97952 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn1bP97952 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1bP97952 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn1bP97952 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Scn1bP97952 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Scn1bP97952 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.92□□□□□ -0.18
Scn1bP97952 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Scn1bP97952 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.92□□□□□ -0.18
Scn1bP97952 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Scn1bP97952 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1bP97952 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.92□□□□□ -0.18
Scn1bP97952 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Scn1bP97952 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn1bP97952 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn1bP97952 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn1bP97952 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Scn1bP97952 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.91□□□□□ -0.18
Scn1bP97952 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms