Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.8□□□□□ -0.36
Npas1P97459 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Npas1P97459 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.79□□□□□ -0.36
Npas1P97459 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.79□□□□□ -0.36
Npas1P97459 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Npas1P97459 Gm2274-201ENSMUST00000184539 609 ntBASIC12.79□□□□□ -0.36
Npas1P97459 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.79□□□□□ -0.36
Npas1P97459 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Npas1P97459 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.79□□□□□ -0.36
Npas1P97459 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npas1P97459 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Npas1P97459 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Npas1P97459 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.78□□□□□ -0.36
Npas1P97459 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Npas1P97459 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.78□□□□□ -0.36
Npas1P97459 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.78□□□□□ -0.36
Npas1P97459 Gm13436-201ENSMUST00000120418 567 ntBASIC12.78□□□□□ -0.36
Npas1P97459 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.78□□□□□ -0.36
Npas1P97459 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Gm30025-201ENSMUST00000218555 728 ntBASIC12.78□□□□□ -0.36
Npas1P97459 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
Npas1P97459 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Npas1P97459 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.78□□□□□ -0.36
Npas1P97459 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Npas1P97459 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Npas1P97459 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npas1P97459 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npas1P97459 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Npas1P97459 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Npas1P97459 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Npas1P97459 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.77□□□□□ -0.37
Npas1P97459 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.77□□□□□ -0.37
Npas1P97459 Gm26039-201ENSMUST00000158152 144 ntBASIC12.77□□□□□ -0.37
Npas1P97459 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Npas1P97459 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.77□□□□□ -0.37
Npas1P97459 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Npas1P97459 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.77□□□□□ -0.37
Npas1P97459 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Npas1P97459 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms