Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-3P97334 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-3P97334 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-3P97334 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Nkx2-3P97334 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Gm8410-201ENSMUST00000117225 605 ntBASIC19.01■□□□□ 0.63
Nkx2-3P97334 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.01■□□□□ 0.63
Nkx2-3P97334 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-3P97334 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Gm23547-201ENSMUST00000158210 271 ntBASIC19■□□□□ 0.63
Nkx2-3P97334 Gm5479-201ENSMUST00000160578 435 ntBASIC19■□□□□ 0.63
Nkx2-3P97334 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-3P97334 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Gm5745-201ENSMUST00000183748 313 ntBASIC18.99■□□□□ 0.63
Nkx2-3P97334 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx2-3P97334 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nkx2-3P97334 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.98■□□□□ 0.63
Nkx2-3P97334 Gm5866-201ENSMUST00000177881 973 ntBASIC18.98■□□□□ 0.63
Nkx2-3P97334 Mir8102-201ENSMUST00000184148 139 ntBASIC18.98■□□□□ 0.63
Nkx2-3P97334 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms