Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.1■□□□□ 0.01
Crnkl1P63154 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.1■□□□□ 0.01
Crnkl1P63154 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.1■□□□□ 0.01
Crnkl1P63154 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Gm10566-201ENSMUST00000086739 996 ntBASIC15.1■□□□□ 0.01
Crnkl1P63154 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.1■□□□□ 0.01
Crnkl1P63154 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Crnkl1P63154 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Crnkl1P63154 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Crnkl1P63154 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Crnkl1P63154 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Crnkl1P63154 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.09■□□□□ 0.01
Crnkl1P63154 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.09■□□□□ 0.01
Crnkl1P63154 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Crnkl1P63154 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crnkl1P63154 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Crnkl1P63154 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crnkl1P63154 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Crnkl1P63154 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.08■□□□□ 0
Crnkl1P63154 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Crnkl1P63154 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.08■□□□□ 0
Crnkl1P63154 Gm13186-201ENSMUST00000118031 316 ntBASIC15.08■□□□□ 0
Crnkl1P63154 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.08■□□□□ 0
Crnkl1P63154 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Crnkl1P63154 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.08■□□□□ 0
Crnkl1P63154 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.08■□□□□ 0
Crnkl1P63154 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Crnkl1P63154 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Crnkl1P63154 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.08■□□□□ 0
Crnkl1P63154 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.07■□□□□ 0
Crnkl1P63154 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Crnkl1P63154 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crnkl1P63154 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.07■□□□□ 0
Crnkl1P63154 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms