Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC8.98□□□□□ -0.97
Rps28P62858 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Rps28P62858 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC8.97□□□□□ -0.97
Rps28P62858 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Rps28P62858 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC8.97□□□□□ -0.97
Rps28P62858 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rps28P62858 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Gm44645-201ENSMUST00000205492 1653 ntBASIC8.97□□□□□ -0.97
Rps28P62858 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rps28P62858 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rps28P62858 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Rps28P62858 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Rps28P62858 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 AC139054.1-201ENSMUST00000226898 1598 ntBASIC8.96□□□□□ -0.97
Rps28P62858 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rps28P62858 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Rps28P62858 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC8.96□□□□□ -0.98
Rps28P62858 Gm44428-201ENSMUST00000204474 874 ntBASIC8.96□□□□□ -0.98
Rps28P62858 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC8.96□□□□□ -0.98
Rps28P62858 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Rps28P62858 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Rps28P62858 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rps28P62858 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms