Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabra1P62812 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gabra1P62812 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Gabra1P62812 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.83□□□□□ -0.35
Gabra1P62812 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Gabra1P62812 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Gabra1P62812 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Gabra1P62812 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Gabra1P62812 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Gm23547-201ENSMUST00000158210 271 ntBASIC12.83□□□□□ -0.36
Gabra1P62812 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.83□□□□□ -0.36
Gabra1P62812 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gabra1P62812 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.83□□□□□ -0.36
Gabra1P62812 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabra1P62812 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Gabra1P62812 Gm715-201ENSMUST00000117865 831 ntBASIC12.82□□□□□ -0.36
Gabra1P62812 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Gabra1P62812 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.82□□□□□ -0.36
Gabra1P62812 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.82□□□□□ -0.36
Gabra1P62812 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.82□□□□□ -0.36
Gabra1P62812 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Gabra1P62812 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gabra1P62812 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.82□□□□□ -0.36
Gabra1P62812 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabra1P62812 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.81□□□□□ -0.36
Gabra1P62812 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.81□□□□□ -0.36
Gabra1P62812 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Gm16061-201ENSMUST00000122167 857 ntBASIC12.81□□□□□ -0.36
Gabra1P62812 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.81□□□□□ -0.36
Gabra1P62812 Gm7213-201ENSMUST00000215977 950 ntBASIC12.81□□□□□ -0.36
Gabra1P62812 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Gabra1P62812 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.81□□□□□ -0.36
Gabra1P62812 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabra1P62812 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms