Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.42□□□□□ -0.26
Sec61a1P61620 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.42□□□□□ -0.26
Sec61a1P61620 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
Sec61a1P61620 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61a1P61620 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.41□□□□□ -0.26
Sec61a1P61620 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sec61a1P61620 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.41□□□□□ -0.26
Sec61a1P61620 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Gm13312-201ENSMUST00000119631 718 ntBASIC13.41□□□□□ -0.26
Sec61a1P61620 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.41□□□□□ -0.26
Sec61a1P61620 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.41□□□□□ -0.26
Sec61a1P61620 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61a1P61620 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sec61a1P61620 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms