Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.99■□□□□ 0.31
Tpm1P58771 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.99■□□□□ 0.31
Tpm1P58771 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.99■□□□□ 0.31
Tpm1P58771 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tpm1P58771 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Tpm1P58771 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.99■□□□□ 0.31
Tpm1P58771 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Tpm1P58771 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Tpm1P58771 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Efs-202ENSMUST00000227037 2540 ntBASIC16.98■□□□□ 0.31
Tpm1P58771 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.98■□□□□ 0.31
Tpm1P58771 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.98■□□□□ 0.31
Tpm1P58771 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.98■□□□□ 0.31
Tpm1P58771 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.98■□□□□ 0.31
Tpm1P58771 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Tpm1P58771 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.98■□□□□ 0.31
Tpm1P58771 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm1P58771 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Mir770-201ENSMUST00000103252 94 ntBASIC16.97■□□□□ 0.31
Tpm1P58771 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.97■□□□□ 0.31
Tpm1P58771 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tpm1P58771 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.97■□□□□ 0.31
Tpm1P58771 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tpm1P58771 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tpm1P58771 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm1P58771 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tpm1P58771 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Tpm1P58771 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.96■□□□□ 0.31
Tpm1P58771 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tpm1P58771 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Tpm1P58771 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.96■□□□□ 0.31
Tpm1P58771 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm1P58771 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tpm1P58771 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tpm1P58771 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.95■□□□□ 0.3
Tpm1P58771 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Tpm1P58771 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.95■□□□□ 0.3
Tpm1P58771 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.95■□□□□ 0.3
Tpm1P58771 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tpm1P58771 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.95■□□□□ 0.3
Tpm1P58771 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tpm1P58771 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm1P58771 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tpm1P58771 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms