Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn2bP55271 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn2bP55271 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.58□□□□□ -0.08
Cdkn2bP55271 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.58□□□□□ -0.08
Cdkn2bP55271 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.58□□□□□ -0.08
Cdkn2bP55271 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cdkn2bP55271 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn2bP55271 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.57□□□□□ -0.08
Cdkn2bP55271 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm15358-201ENSMUST00000119249 520 ntBASIC14.57□□□□□ -0.08
Cdkn2bP55271 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.57□□□□□ -0.08
Cdkn2bP55271 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn2bP55271 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Cdkn2bP55271 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.56□□□□□ -0.08
Cdkn2bP55271 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.56□□□□□ -0.08
Cdkn2bP55271 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdkn2bP55271 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms