Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm25948-201ENSMUST00000175334 112 ntBASIC16.19■□□□□ 0.18
NrlP54846 Gm20949-201ENSMUST00000206478 952 ntBASIC16.19■□□□□ 0.18
NrlP54846 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.19■□□□□ 0.18
NrlP54846 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NrlP54846 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.19■□□□□ 0.18
NrlP54846 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NrlP54846 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NrlP54846 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NrlP54846 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NrlP54846 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NrlP54846 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NrlP54846 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NrlP54846 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.18■□□□□ 0.18
NrlP54846 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Gm9385-201ENSMUST00000117563 472 ntBASIC16.18■□□□□ 0.18
NrlP54846 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.18■□□□□ 0.18
NrlP54846 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NrlP54846 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.18■□□□□ 0.18
NrlP54846 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.18■□□□□ 0.18
NrlP54846 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NrlP54846 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NrlP54846 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.17■□□□□ 0.18
NrlP54846 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NrlP54846 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NrlP54846 Gm16198-201ENSMUST00000118766 670 ntBASIC16.17■□□□□ 0.18
NrlP54846 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.17■□□□□ 0.18
NrlP54846 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NrlP54846 Gm8318-201ENSMUST00000182954 872 ntBASIC16.17■□□□□ 0.18
NrlP54846 Gm27321-201ENSMUST00000185021 205 ntBASIC16.17■□□□□ 0.18
NrlP54846 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Gm2272-201ENSMUST00000194903 582 ntBASIC16.17■□□□□ 0.18
NrlP54846 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.17■□□□□ 0.18
NrlP54846 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.17■□□□□ 0.18
NrlP54846 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NrlP54846 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NrlP54846 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.17■□□□□ 0.18
NrlP54846 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NrlP54846 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NrlP54846 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.17■□□□□ 0.18
NrlP54846 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NrlP54846 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NrlP54846 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.16■□□□□ 0.18
NrlP54846 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.16■□□□□ 0.18
NrlP54846 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NrlP54846 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NrlP54846 Mir7023-201ENSMUST00000185093 64 ntBASIC16.16■□□□□ 0.18
NrlP54846 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.16■□□□□ 0.18
NrlP54846 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NrlP54846 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.16■□□□□ 0.18
NrlP54846 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.16■□□□□ 0.18
NrlP54846 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NrlP54846 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NrlP54846 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NrlP54846 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NrlP54846 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NrlP54846 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NrlP54846 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms