Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RoraP51448 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RoraP51448 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RoraP51448 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RoraP51448 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RoraP51448 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.38□□□□□ -0.11
RoraP51448 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RoraP51448 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Gm8318-201ENSMUST00000182954 872 ntBASIC14.38□□□□□ -0.11
RoraP51448 Gm5177-201ENSMUST00000183092 997 ntBASIC14.38□□□□□ -0.11
RoraP51448 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.38□□□□□ -0.11
RoraP51448 Gm18246-201ENSMUST00000221023 728 ntBASIC14.38□□□□□ -0.11
RoraP51448 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.38□□□□□ -0.11
RoraP51448 Chchd1-203ENSMUST00000224633 557 ntBASIC14.38□□□□□ -0.11
RoraP51448 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RoraP51448 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.38□□□□□ -0.11
RoraP51448 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RoraP51448 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RoraP51448 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RoraP51448 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.37□□□□□ -0.11
RoraP51448 Gm26308-201ENSMUST00000157768 69 ntBASIC14.37□□□□□ -0.11
RoraP51448 Gm45747-201ENSMUST00000212203 999 ntBASIC14.37□□□□□ -0.11
RoraP51448 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RoraP51448 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RoraP51448 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.37□□□□□ -0.11
RoraP51448 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RoraP51448 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.36□□□□□ -0.11
RoraP51448 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.36□□□□□ -0.11
RoraP51448 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.36□□□□□ -0.11
RoraP51448 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.36□□□□□ -0.11
RoraP51448 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms