Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox2P48432 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Sox2P48432 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Sox2P48432 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox2P48432 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox2P48432 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.28□□□□□ -0.12
Sox2P48432 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sox2P48432 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Sox2P48432 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox2P48432 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox2P48432 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox2P48432 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox2P48432 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.27□□□□□ -0.12
Sox2P48432 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Sox2P48432 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sox2P48432 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sox2P48432 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox2P48432 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.27□□□□□ -0.13
Sox2P48432 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.27□□□□□ -0.13
Sox2P48432 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.27□□□□□ -0.13
Sox2P48432 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox2P48432 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox2P48432 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox2P48432 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.26□□□□□ -0.13
Sox2P48432 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Sox2P48432 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox2P48432 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox2P48432 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sox2P48432 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Gm12134-201ENSMUST00000122109 520 ntBASIC14.26□□□□□ -0.13
Sox2P48432 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox2P48432 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox2P48432 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox2P48432 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox2P48432 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.26□□□□□ -0.13
Sox2P48432 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sox2P48432 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Sox2P48432 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox2P48432 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.25□□□□□ -0.13
Sox2P48432 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms