Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfx3P48381 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rfx3P48381 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfx3P48381 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfx3P48381 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rfx3P48381 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.77□□□□□ -0.2
Rfx3P48381 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.77□□□□□ -0.21
Rfx3P48381 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.77□□□□□ -0.21
Rfx3P48381 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Gm15372-201ENSMUST00000120729 834 ntBASIC13.77□□□□□ -0.21
Rfx3P48381 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.77□□□□□ -0.21
Rfx3P48381 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rfx3P48381 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Rfx3P48381 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.77□□□□□ -0.21
Rfx3P48381 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.77□□□□□ -0.21
Rfx3P48381 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.77□□□□□ -0.21
Rfx3P48381 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.77□□□□□ -0.21
Rfx3P48381 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.77□□□□□ -0.21
Rfx3P48381 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.77□□□□□ -0.21
Rfx3P48381 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.77□□□□□ -0.21
Rfx3P48381 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.77□□□□□ -0.21
Rfx3P48381 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.77□□□□□ -0.21
Rfx3P48381 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Rfx3P48381 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx3P48381 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.76□□□□□ -0.21
Rfx3P48381 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Rfx3P48381 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Rfx3P48381 Gm27867-201ENSMUST00000184778 125 ntBASIC13.76□□□□□ -0.21
Rfx3P48381 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rfx3P48381 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.76□□□□□ -0.21
Rfx3P48381 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.76□□□□□ -0.21
Rfx3P48381 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rfx3P48381 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.76□□□□□ -0.21
Rfx3P48381 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfx3P48381 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.75□□□□□ -0.21
Rfx3P48381 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rfx3P48381 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Rfx3P48381 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.75□□□□□ -0.21
Rfx3P48381 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Rfx3P48381 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.75□□□□□ -0.21
Rfx3P48381 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.75□□□□□ -0.21
Rfx3P48381 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.75□□□□□ -0.21
Rfx3P48381 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfx3P48381 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfx3P48381 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms