Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.38□□□□□ -0.11
Nkx2-6P43688 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Gm5312-201ENSMUST00000203728 547 ntBASIC14.38□□□□□ -0.11
Nkx2-6P43688 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.38□□□□□ -0.11
Nkx2-6P43688 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.38□□□□□ -0.11
Nkx2-6P43688 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-6P43688 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.37□□□□□ -0.11
Nkx2-6P43688 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Rpph1-201ENSMUST00000175096 319 ntBASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm10576-201ENSMUST00000191927 825 ntBASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.37□□□□□ -0.11
Nkx2-6P43688 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-6P43688 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.36□□□□□ -0.11
Nkx2-6P43688 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.36□□□□□ -0.11
Nkx2-6P43688 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.36□□□□□ -0.11
Nkx2-6P43688 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-6P43688 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx2-6P43688 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.35□□□□□ -0.11
Nkx2-6P43688 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Gm13365-201ENSMUST00000121188 973 ntBASIC14.35□□□□□ -0.11
Nkx2-6P43688 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Rprl2-201ENSMUST00000157150 290 ntBASIC14.35□□□□□ -0.11
Nkx2-6P43688 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms