Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.57□□□□□ -0.08
Sox18P43680 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.57□□□□□ -0.08
Sox18P43680 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.57□□□□□ -0.08
Sox18P43680 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Gm25857-201ENSMUST00000082788 129 ntBASIC14.57□□□□□ -0.08
Sox18P43680 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.57□□□□□ -0.08
Sox18P43680 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.57□□□□□ -0.08
Sox18P43680 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Syt7-205ENSMUST00000224135 1557 ntBASIC14.56□□□□□ -0.08
Sox18P43680 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.56□□□□□ -0.08
Sox18P43680 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox18P43680 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox18P43680 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.56□□□□□ -0.08
Sox18P43680 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox18P43680 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox18P43680 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox18P43680 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox18P43680 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Sox18P43680 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sox18P43680 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox18P43680 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Gm15653-201ENSMUST00000119247 907 ntBASIC14.55□□□□□ -0.08
Sox18P43680 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.55□□□□□ -0.08
Sox18P43680 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox18P43680 Gm2272-201ENSMUST00000194903 582 ntBASIC14.55□□□□□ -0.08
Sox18P43680 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.55□□□□□ -0.08
Sox18P43680 Gm6888-201ENSMUST00000221983 706 ntBASIC14.55□□□□□ -0.08
Sox18P43680 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.55□□□□□ -0.08
Sox18P43680 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox18P43680 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox18P43680 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox18P43680 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Sox18P43680 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sox18P43680 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox18P43680 Gm16215-201ENSMUST00000161990 637 ntBASIC14.54□□□□□ -0.08
Sox18P43680 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.54□□□□□ -0.08
Sox18P43680 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Gm44855-201ENSMUST00000205725 362 ntBASIC14.54□□□□□ -0.08
Sox18P43680 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.54□□□□□ -0.08
Sox18P43680 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox18P43680 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.54□□□□□ -0.08
Sox18P43680 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox18P43680 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox18P43680 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms