Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.59■□□□□ 0.09
Cxcl12P40224 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.59■□□□□ 0.09
Cxcl12P40224 Mir1897-201ENSMUST00000122581 272 ntBASIC15.59■□□□□ 0.09
Cxcl12P40224 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.59■□□□□ 0.09
Cxcl12P40224 Gm42612-201ENSMUST00000197986 623 ntBASIC15.59■□□□□ 0.09
Cxcl12P40224 Gm43170-201ENSMUST00000199827 612 ntBASIC15.59■□□□□ 0.09
Cxcl12P40224 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.59■□□□□ 0.09
Cxcl12P40224 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.59■□□□□ 0.09
Cxcl12P40224 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cxcl12P40224 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cxcl12P40224 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.59■□□□□ 0.09
Cxcl12P40224 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.58■□□□□ 0.09
Cxcl12P40224 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cxcl12P40224 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Cxcl12P40224 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Cxcl12P40224 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cxcl12P40224 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cxcl12P40224 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cxcl12P40224 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cxcl12P40224 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Gm4875-201ENSMUST00000118257 786 ntBASIC15.58■□□□□ 0.08
Cxcl12P40224 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.58■□□□□ 0.08
Cxcl12P40224 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Gm6266-201ENSMUST00000203844 806 ntBASIC15.58■□□□□ 0.08
Cxcl12P40224 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Gm45668-201ENSMUST00000211271 493 ntBASIC15.58■□□□□ 0.08
Cxcl12P40224 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.58■□□□□ 0.08
Cxcl12P40224 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cxcl12P40224 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cxcl12P40224 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.57■□□□□ 0.08
Cxcl12P40224 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.57■□□□□ 0.08
Cxcl12P40224 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.57■□□□□ 0.08
Cxcl12P40224 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm6007-201ENSMUST00000208170 823 ntBASIC15.57■□□□□ 0.08
Cxcl12P40224 Gm46209-201ENSMUST00000217912 553 ntBASIC15.57■□□□□ 0.08
Cxcl12P40224 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cxcl12P40224 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cxcl12P40224 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.56■□□□□ 0.08
Cxcl12P40224 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cxcl12P40224 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.56■□□□□ 0.08
Cxcl12P40224 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms